LOCUS CO897591 501 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03f11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897591 VERSION CO897591.1 GI:51237381 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 501) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 545 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..501 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tttacatgca cttcacaagc gcgcattaat cacatcactt tatgcttgcc cagtgaatgc 61 gcactcgaaa gtgacgatct tttgaaatgc aacagaggag ttgatattaa aatttttaac 121 ctaaaaaacg aaggaaaggc cgaactcata aacgcatgtc tcgagttaac ttcatcaagt 181 aaaaatgtga ctgttggcaa aatatccgaa gttcttgcac taaacaatga tgggcaaaca 241 tttgaaccag attttatagt ctgcattgga ttcaactcct taaatgggtt ccgattggca 301 gaattttcgc cgtgggtact gcgtacaacc gaattccatt acattgacac cttttcatcg 361 tccgagctga tcaagcagtc agagttcaat gctctcctct ctgctttttc tcgtcgtcat 421 aaaaggtatg ggcactanca aagagcaaac agtcagagca gcaataacac tgttttactg 481 atactgataa actcgattcc c //