LOCUS CO897589 638 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03f09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:P90860 P90860 F36A2.7 PROTEIN. [1], mRNA sequence. ACCESSION CO897589 VERSION CO897589.1 GI:51237379 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 638) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..638 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tttgccttct agagtcttaa tttttactcc acatatttgt acttctggca gagctcgaac 61 ttcgaaatga tcccaatttc taaattggct tcaccactcc acccagcctc ttcgggtgcc 121 attctccgtg ttttcgcgat tcgaaaattt gccagtgctg ttttggaacg gccgccaaag 181 gctaagatcc aactgaaacc accaccaggc gagaagggct acatgaacta tgaacgtgac 241 ttttcacgcg aatcacgtta tacaaagcca cataagaaga ccgacacatt tataagattt 301 gtaacattta acgctcgcca tcacatggag ctctggccga tcgtatttct ctgcggtgtc 361 tcttgttgcc tagtcgtggg tatagcctac ataagttttg aaaaagtgga agtctggctt 421 gacagaagca ccaagacccc accatgggat tgggcgcgca ttcgtgacaa atactggaga 481 atgcaaacag tatttttcga tccacttggc gggacccacc agcgtataga aatcatggag 541 aagctacagg atgagatgtt ggaggcggcc aagcagcgtg gaacccgcga tgccggtggc 601 tacattgtta ctaactaaaa cgggaaggcc agcaaagc //