LOCUS CO897578 424 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03e06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897578 VERSION CO897578.1 GI:51237368 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 424) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 459 Seq primer: SL1 primer High quality sequence stop: 420. FEATURES Location/Qualifiers source 1..424 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cttcatttct gccgcgccca ttcccagccg accaccacat cacatcatcc attatgcgct 61 tcctggtgct cgtccccctc ggcttgttgc tgcttgccct ctgttgtctg ggtgcgaagg 121 agggccgctc ggactcgtcg gagatgcgcg aggggatgtg gggcatggcc ggctcggagg 181 aggtgaagaa gcaggagaag gcgaacaagg agaagcactc ttccgaggag ctgggcggcg 241 gacggcctcg tccccacgcg ctgatgaggg cggtagtgcg ccgtcgccgt tgaaaatggg 301 gagaaagaac tgtgtattaa ttagactgga ggggaactat cgaaagggcc ctagaagagc 361 aacatcggcc ctctggtcca gtgtgttccc tattttcaaa taaatatgta ttccgccaaa 421 aaaa //