LOCUS CO897575 519 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03e02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:CYC1_ASCSU P92504 CYTOCHROME C, TYPE-1. [1], mRNA sequence. ACCESSION CO897575 VERSION CO897575.1 GI:51237365 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 519) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 547 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..519 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctgagactgc caatggccga aattcctgag ggtgactacg agaagggaaa gaaagtcttc 61 aaggcccggt gtctccaatg ccacgtgatc gactccatgg ccacaaagac aggaccaacc 121 ctgaatggga tttgngggaa ggaaaagtgg acaggtaccc ggattcgact attctgccgc 181 caacaaaaat aagggtgttg tttggaatcg cgaaacgctc ttcgaatacc tgctcaatcc 241 aaagaaatat atcccgggga cgaagatggt ttttgcaggg ctgaagaagg tcgacgaaag 301 ggcggatctc atcaagtaca tcgaggttga aagtcagaaa ccgccagcat gatgaattga 361 cgcatgagag gttcatcgcc cgtccacgac aaacaggata gtttatagtc agtcacgtgc 421 gagacacttg gttaaaattg tttttcacct agacattttc acactctgag gccctcgttt 481 ctaagaaatt gttagttcga aaaaataaaa ttcgttgac //