LOCUS CO897570 409 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03d07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q93315 Q93315 C31E10.7 PROTEIN. [1], mRNA sequence. ACCESSION CO897570 VERSION CO897570.1 GI:51237360 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 409) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 395. FEATURES Location/Qualifiers source 1..409 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aatggtcgag atcagcggca aaaagttcac gcgcgccgaa gtgaccgagc acaacaacag 61 cggctccgcg tggatcatca tcggcaacaa ggtgtacgac gtgaccaagt tcctggacga 121 gcatcccggc ggttgtgaag tgctcctgga gaaggcgggc gatgatggca ccgaggcctt 181 cgaggacatt ggccattcaa cggacgcgcg ccaaatgaag gaagactttt gcattggcca 241 ggtggtggag gaggaaaagt ggaagtacag ctatgacaag cgcgagacgg tcgccgaatc 301 gaaagcccag aaagagggcg caacggccgc gcaaaggaat ggtcccactg agatgctggt 361 gtatgcactg ttcgcggcca tttgtgcagc cattctcttc tatttgctg //