LOCUS CO897559 536 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03c03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YQ5B_CAEEL Q09254 HYPOTHETICAL 15.4 KD PROTEIN C16C10.11 IN CHROMOSOME III. [1], mRNA sequence. ACCESSION CO897559 VERSION CO897559.1 GI:51237349 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 536) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 649 Seq primer: SL1 primer High quality sequence stop: 521. FEATURES Location/Qualifiers source 1..536 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttattcatta gcttacataa aaatggttcg aagacgctct gcttctccga gggccagtgc 61 tcccgtgcgc tcagccgcgc cggctcgtgc cccggctcct gctgccgcgc ctcctcgtcc 121 ggctggcgct ccgcctgctg gcgcaacccc gcaaggccct ggccttttcg gccaaatggc 181 tgcaacagcg ggaggtgtcg caatcggttc ggctgtgggc catgccatcg gaaacatgtt 241 ctctggcggc gctgcgcgtg aggccgctcc agccgcagaa aacaacgctc aaggctatga 301 gaagcaacag ccgcagcaat actcacagcc gtgcgagttc gaatggcgcc aatttcttga 361 ctgttcccaa aaccaatcgg atgtcagcgt gtgccagggc tacaacgact tgttcaagga 421 gtgcaaggct cgtcaaggcc tctaaatgga agggtctggc ggctatcgag attgattgaa 481 agctcgagca atgaaaccgc gatacatatt tagttggatc anattacacc ttcacg //