LOCUS CO897555 492 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03b10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897555 VERSION CO897555.1 GI:51237345 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 492) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 546 Seq primer: SL1 primer High quality sequence stop: 461. FEATURES Location/Qualifiers source 1..492 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctctcggacg ctttagggca cgagagcgaa cttggacgag tcgagcggcg cccatctcga 61 ctgcacggcg aatggcgttc atcgcatgga acagcacccc cgaggaggtg gatgcgcccg 121 ccgaagcgga ggaaccgaac aacaatggaa caatgcaaac tgggagcagc gctgaggaag 181 aagtgaagag cgccattcgg ccaacagacg gaacaacaac aacagagcaa gaaggaaacg 241 gacgaacaac aaaaacaaag cacagccgca gagtctttct cgacgcattc ggcaccccca 301 gcagagtctt tcacaagcca ttcattttcg gtctttcatc cccgcaatcc accatttgtt 361 gcccgcaccc caaaagccca aaaacagaac tacaaacaca cacaaacaca attgtcgcgg 421 tcagcactgt gcccggagga ctgtgaccaa aacatgccct anatgtgcga atgaataaaa 481 cggattcncc ac //