LOCUS CO897551 598 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03b05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS8_CAEEL P48156 PROBABLE 40S RIBOSOMAL PROTEIN S8. [1], mRNA sequence. ACCESSION CO897551 VERSION CO897551.1 GI:51237341 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 598) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Trace considered overall poor quality Seq primer: SL1 primer Sequence considered overall poor quality. FEATURES Location/Qualifiers source 1..598 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gggtatctcc cttgacaggt ggccctcgcg cattagaacc ggggggcaac gcattcccat 61 tcacaagaaa ctaaattatg acatggcact tcgaactgca tttactaaga ttggtcccaa 121 taggatccac ttggtccgtt gccttggtgg aactatctaa cgccgaggac tgcgttagca 181 cgcttgaaac ttcccttggt ccgcttatgg gagcacccgc cagatcctta ttttctgctc 241 tgagtagcat gcttcgcact cctatctgtt ccgcacgtcg accctcgtcc agggctccat 301 cctcgccatt gactctcttc cgttccgcca ctggtaacag gcccactatg cgctgccttt 361 ggctcgcaag aagggacaaa agttgaccga cgaaaaagaa gcgcgcatca atggggcaca 421 aaagcgttcc aagtcgatcc tgaagaagta ctcagagcgc caaaagacag ccgccgtata 481 gccgcatctg cttgagcagt tccaatctgg acgtctcctt gcttgcatca gctccatacc 541 cggacatagc ggacgccttg acggctatat cctgcagggc acagacctcc attcctac //