LOCUS CO897548 697 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03a11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21924 Q21924 R11A8.2 PROTEIN. [1], mRNA sequence. ACCESSION CO897548 VERSION CO897548.1 GI:51237338 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 697) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 688. FEATURES Location/Qualifiers source 1..697 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cctctcccct ctgtttataa tcaccaatca gcatattttt atcaattaaa aaacagcccg 61 cgcaaaaaca acaatgcatc caactactcc atcacctgat tcttcaaatc cgtccattgt 121 tgatgcaagt gaagagattg tcgcaaaaga ggatgttatg attgagactt ctaaaacact 181 atcttcgtct tcgactgccg aaagcggggg gaaaatctca ttcagcgtta ccaaaaggca 241 aacgaccaga atagttacga caaaaattcg acttgatcgt gcaagagatg ctgctgaaga 301 ggaggaggag gagcaacaaa acaggaagag aggcgtcctc agcttggaag atggcgtttg 361 catagatgcc gaagcgccaa acaaaaaacg tgagaagaag gtgtttgtca tcccggtagt 421 tcaaacgtcc agccaattgc aaatcgagcg actgaatagg ttggtggatg aaggcactgc 481 cacagaatca gatcgtgctc gtctcactct attgctagaa agtttgggag aagtacctac 541 tcaattaaaa aatgagaaat tcacacttcc atctggcgat attcaaactg gaccgacaac 601 cgtgatagca gatgaaaccg atccagacta tgaaagtatg cctattggcg aatttggtct 661 cgctttcttg cgtggttgtg gctggaaaga tgaaaat //