LOCUS CO897546 482 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03a08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897546 VERSION CO897546.1 GI:51237336 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 482) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 486 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..482 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcattgatga tggatgtccg agccggacct agcacttctt cacgtcggca gtccgaacct 61 gaagatatgg agacggaagc acaaattgca aaagcactaa agctgatgag cggaaaggcc 121 cttcgccata ttccaaagaa cacacttgat tcagaggata ccacaaacaa taatgataaa 181 gcgctccagc aaaagctctc cgcactccaa cacgaggaga ggtacttact gagtctgcaa 241 acgaagcttc gctcgcacca gagactgctt caattggagc aaactcagct ctcacaagcc 301 ataaacatgg ccatggacga ctatcctatg gataaagcca gtgggcattg aaaacgggac 361 tatttttgat aaaatcgaca ctttcatcag tttcagtcgt taaataattt agttgatttg 421 ttagataaat ggcccttcat tanaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaccc 481 aa //