LOCUS CO897543 519 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03a03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO897543 VERSION CO897543.1 GI:51237333 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 519) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..519 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcgacagcta tttgttgttc tccgtcgcac aactggaaaa atgagcgcaa cagagcagca 61 gacacaaaag cggcgcgccg aggagaatgg cgacgaagaa gtcgcaacaa aggcgcagaa 121 agtcgacaac ggaggcgctg taaagggcgc aaatgacgtg aacgccaaca gcaacaagct 181 gaaagccaaa gcggtgaata acgaaaaggt agccgccgag gaggagacgg aagagaacga 241 gggcgaggag gagagcgagg gcgagtncgg ggcaggagag gacgacgacc tgggcgacga 301 ggcggactcc ggggaggagg acgctgacga cgaggaggac gatgaaggcg cgggtggaga 361 cgacgacgag gagggagacg atgcagaaga ggacgcggaa ggggacgaag aggaggagga 421 agaggaagaa gaatgagctg gccggcgaca ctttaagcac ccaaaccaaa gaatgggaca 481 tcgagacgaa atttggaatg tttgcgattc gtcgtcgtt //