LOCUS CO897661 489 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04g01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO897661 VERSION CO897661.1 GI:51237451 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 489) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..489 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgacggcgga gaggagctct ccagacatct gataaaccga ttgaaaaagg aaaaaggatg 61 tgaagagaag gcaaagctca gggcggagtt ggcgcaggcc gaagagcgta gcaagagagc 121 caaggaacga agcgagattg ccaaggaacg tagcaagaga gccaaggaac gaagcgagat 181 tgccaaggaa cgtagcaaga gagccaagga acgaagcgag attgccaagg aacgtagcaa 241 gagagccaag gaacgaagcg agattgccaa ggaacgtagc aagagagcta aggaacgtat 301 cgaaatcgct aacgctaaaa ttgccgagct tagccgccaa ttggaggagt tgcgcaacat 361 gcaggcccac agaatgaatg acgtcgcgtc tgctggctga agtgtttttc tcgatcaatc 421 agttaactgt tccttcaaaa ttgttttgta agccaacaat ctctgattta tccgttatat 481 catcccctc //