LOCUS CO897660 570 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04f12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YMS2_CAEEL P34498 PUTATIVE PRE-MRNA SPLICING FACTOR ATP-DEPENDENT RNA HELICASE K03H1.2. [1], mRNA sequence. ACCESSION CO897660 VERSION CO897660.1 GI:51237450 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 570) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 545. FEATURES Location/Qualifiers source 1..570 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agttctaagt tctctataaa aatgcaatcg atggatgatg acgcttcggt ttccgtattg 61 gagggaacaa gtggtagaga accgggtgga ttgattttca tgaaaaatcc aagcaaatgc 121 aaagattcat cagtgaagga cgacgacaaa ttgttcaaaa agcccacttc aatacttggt 181 cttgacaggc ttgctaggca aaagcgcgaa gaaaatttac gcaaaaggca agctgaatca 241 ggtgatgaaa cccccggact gaccgatagc acaagacgcg agatcacaca atatatagcg 301 gaaaaatatc gcgatgacag agatcggcgt ggaatcgatg ccggccttaa agaggagaga 361 aagagatgcg acagagatcg agatagaagg gatagaaatc ggcgccatcg atttgacaga 421 aacaggcctt catggaaaga tgtcgatacg cctaaattca aattgccaaa cactccttct 481 gcatcacaat gggacgagga agatttcccg gggcagaggc ctccctccaa aaagtctgct 541 tgggactttt aaacgccaaa aaaagaaaaa //