LOCUS CO897655 564 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04f07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to WP:CE21666 Y39B6A.F, mRNA sequence. ACCESSION CO897655 VERSION CO897655.1 GI:51237445 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 564) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 550. FEATURES Location/Qualifiers source 1..564 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 attcgctttt cttggcatta ttcaatagat taaaaaatga ccactcggca attcaataaa 61 ttgtacctga tgccaccaaa tcgcaaaacc cgcatggctg aaacgatgga cataatattc 121 gggcgaaaag aggaagaaaa aagagtccaa ctcgatttat tgaatcgaga agtgaagcgc 181 agtaaaccgc ggcgagaaga tcaatcattt tctcaggatt ggcccagtgt gtggccagct 241 gcgcagtcat ttcgctcttc cgtggtacca attccggttc gaatgggtta ccgcaagaac 301 ccggaaaaaa aagccccggc agctgcatat gccaatctgg agctcgcaaa aatggccaat 361 tttctgcact tgacacctgc acatgtccaa cgtcactgcg aggccatcaa aaagttttgt 421 accaagtttc ccgaggaatt gaaggagcgc gaatgcgaag ctcgctactt cccgctacgc 481 taccattacg acacatatgt acatcaggga aatagcattc gtgatatgcg cgcgcgcgtc 541 gtcacagtca cgcctgaggt tgga //