LOCUS CO897582 424 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03e10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897582 VERSION CO897582.1 GI:51237372 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 424) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..424 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttgaaatgga gtttaagaat ggtgaacgga gcggtagggc cgacgcaacg tggacggagg 61 tgcacgaagc ggtgtatgca ctgctctaca agaactacct ggtcgggatg cacgatacgt 121 ttgaaatcgt gcacgaagtc tatcgcttta acggcatctg cctcatcgac tttgcgtcca 181 agcatggctt tgcctctttc gaagagatgc tgcattcggt caagatggaa aacgtggtcg 241 taattgaaga ggtccagaca ccagaaacca agcgccgata ctttcttcca atgaagtacc 301 gccatcgccc caaactgagc gcagaatttg cgcaaacgcg tgagacaagc tgcgccaccg 361 aaattgattc tcggactcct aacagaggaa gcgccctcgt ccacgctgtc cgaggcggac 421 tctg //