LOCUS CO897561 459 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03c05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains MER22.b1 MER22 repetitive element, mRNA sequence. ACCESSION CO897561 VERSION CO897561.1 GI:51237351 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 459) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 457. FEATURES Location/Qualifiers source 1..459 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgttcccgtt cctccgatgc tcgcgatccc ctctgtgctg ctctgcgtct cactgctcgc 61 ctcttcctgc accgaagcga ccagcagcag ttcagatgct gaggcagcgt tggcacagac 121 tttccggcag cgacgtgagc caagtgccct gctgagccga tacggacgtg cagcagtgct 181 gtcgcgttac gggaagagga gcgagcccga gaaggaagag gatggaagga acaaacgcga 241 ggaagaaggc ccctggttcc tgtgcaagcg cactcccgac ggccatttcc tgcgctgccg 301 aagtccgttc cagggctgaa cgagagaaag gcgcgacaat gaaaaaggcg atccccggaa 361 aggctaagca ttttcatttc aaacgtggac actccgtttc ctttccgttc tccgttttta 421 tcatcaattg tgtctgtcct ttgcgggaat cgggaatca //