LOCUS CO897544 542 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03a05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:CYC1_ASCSU P92504 CYTOCHROME C, TYPE-1. [1], mRNA sequence. ACCESSION CO897544 VERSION CO897544.1 GI:51237334 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 542) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 548 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..542 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gctttttgct gagactgcca atggccgaaa ttcctgaggg tgactacgag aagggaaaga 61 aagtcttcaa ggcccggtgt ctccaatgcc acgtgatcga ctccatggcc acaaagacag 121 gaccaaccct gaatgggatt tggggaagga aaagtggaca ggtacccgga ttcgactatt 181 ctgccgccaa caaaaataag ggtgttgttt ggaatcgcga aacgctcttc gaatacctgc 241 tcaatccaaa gaaatatatc ccggggacga agatggtttt tgcagggctg aagaaggtcg 301 acgaaagggc ggatctcatc aagtacatcg aggttgaaag tcagaaaccg ccagcatgat 361 gaattgacgc atgagaggtt catcgcccgt ccacgacaaa caggatagtt tatagtcagt 421 cacgtgcgag acacttggtt aaaattgttt ttcacctaga cattttcaca ctctgaggcc 481 ctcgtttcta agaaattgtt agttcgaaaa aataaaattc gttgacaaaa aaaaaaaaca 541 aa //